IVD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:28.4 FPKM
GTEx:12.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041391

 

Antibody HPA044250

 

Endothelial cells

Low   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not available   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

28.4

overview Male, age 54
Sample 1
FPKM: 27.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 30.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 30.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 27.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 36.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.8
Samples: 149

Max RPKM: 18.7
Min RPKM: 6.2
Std RPKM: 2.1
Median RPKM: 12
GTEX-Y9LG-1326-SM-4VBQB 18.7
GTEX-YJ8O-1426-SM-5PNV9 16.4
GTEX-X4EO-2726-SM-4E3HS 15.7
GTEX-WYVS-1126-SM-4SOJX 15.5
GTEX-ZPIC-2626-SM-57WE2 15.5
GTEX-117YX-0526-SM-5EGJH 15.4
GTEX-ZPU1-1726-SM-4WWFV 15.4
GTEX-X15G-1526-SM-4PQZM 15.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.8
Samples: 196

Max RPKM: 21.6
Min RPKM: 1.2
Std RPKM: 3.3
Median RPKM: 13.8
GTEX-R53T-1326-SM-48FCQ 21.6
GTEX-Y3IK-1826-SM-4WWDS 21.2
GTEX-PLZ5-1126-SM-3P613 20.7
GTEX-1399R-2226-SM-5P9JB 20.6
GTEX-YF7O-1726-SM-5IFJ9 20.6
GTEX-XPVG-1826-SM-4B64X 20.3
GTEX-T5JW-1126-SM-4DM5V 20.2
GTEX-XV7Q-2126-SM-4BRVX 20.1
Show all