TST

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:110.7 FPKM
GTEx:55.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003044

 

Antibody HPA003643

 

Antibody CAB009546

 

Endothelial cells

Not detected   Not detected   Medium  

Glandular cells

High   High   High  

Peripheral nerve/ganglion

Not detected   Not detected   Medium  
     
     

COLON - HPA RNA-seq

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Average FPKM

110.7

overview Male, age 54
Sample 1
FPKM: 99.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 110.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 159.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 179.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 70.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 74.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 81.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

55.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.8
Samples: 149

Max RPKM: 35.1
Min RPKM: 3.3
Std RPKM: 4.5
Median RPKM: 7.9
GTEX-Y5LM-1426-SM-5RQJL 35.1
GTEX-XBED-1726-SM-47JYO 33.7
GTEX-V955-1726-SM-4JBHF 21.7
GTEX-WQUQ-2626-SM-4MVNP 21.7
GTEX-ZPCL-1626-SM-57WGC 20.7
GTEX-11EQ9-1526-SM-5PNY7 20.3
GTEX-YJ8A-1726-SM-5P9IQ 19.1
GTEX-146FH-2426-SM-5Q5EW 17.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 101.3
Samples: 196

Max RPKM: 423.6
Min RPKM: 3.6
Std RPKM: 78.2
Median RPKM: 101.9
GTEX-1399R-2226-SM-5P9JB 423.6
GTEX-XUJ4-2026-SM-4BOOW 280.6
GTEX-Y3IK-1826-SM-4WWDS 254.1
GTEX-T5JW-1126-SM-4DM5V 252.1
GTEX-UJHI-1126-SM-4IHLN 250.3
GTEX-Y5LM-1526-SM-4VDTA 249.4
GTEX-ZYWO-1626-SM-5E44H 243.0
GTEX-111CU-1426-SM-5GZYP 235.3
Show all