GFER

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.0 FPKM
GTEx:4.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA041227

 

Endothelial cells

High  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 

COLON - HPA RNA-seq

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Average FPKM

20.0

overview Male, age 54
Sample 1
FPKM: 31.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 22.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 24.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 17.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 15.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.4
Samples: 149

Max RPKM: 11.1
Min RPKM: 0.8
Std RPKM: 1.5
Median RPKM: 3
GTEX-ZLV1-1326-SM-4WWER 11.1
GTEX-Y3I4-1126-SM-4TT7Y 7.6
GTEX-XUZC-1526-SM-4BRV4 7.4
GTEX-XV7Q-2226-SM-4BRVY 7.3
GTEX-1399U-2226-SM-5KLZI 7.2
GTEX-131XE-1026-SM-5EGKE 7.1
GTEX-ZLFU-1426-SM-4WWEU 7.0
GTEX-131YS-2926-SM-5EGKI 6.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.6
Samples: 196

Max RPKM: 16.9
Min RPKM: 1.1
Std RPKM: 3
Median RPKM: 5
GTEX-PWN1-1426-SM-48TDF 16.9
GTEX-131XG-1826-SM-5LZV4 15.5
GTEX-XUJ4-2026-SM-4BOOW 13.4
GTEX-WOFM-2026-SM-4OOSQ 13.1
GTEX-U3ZN-2126-SM-4DXU1 12.9
GTEX-TML8-1326-SM-4DXTO 12.8
GTEX-T5JW-1126-SM-4DM5V 12.5
GTEX-145MN-1726-SM-5SIA6 12.1
Show all