SBDS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:90.2 FPKM
GTEx:100.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA028891

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

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Average FPKM

90.2

overview Male, age 54
Sample 1
FPKM: 79.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 83.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 74.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 98.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 86.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 130.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 78.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

100.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 114.5
Samples: 149

Max RPKM: 240.4
Min RPKM: 61.6
Std RPKM: 30.4
Median RPKM: 109.3
GTEX-11ZU8-1126-SM-5EQ5K 240.4
GTEX-ZDTS-2726-SM-5L3E2 221.4
GTEX-11P7K-1826-SM-5HL5A 187.1
GTEX-14C5O-2626-SM-5RQI5 182.0
GTEX-11WQK-2526-SM-5CVL8 181.8
GTEX-ZTSS-1226-SM-51MSZ 181.5
GTEX-139UW-2326-SM-5KM1Y 179.4
GTEX-ZY6K-1326-SM-5GZWP 172.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 86.1
Samples: 196

Max RPKM: 229.8
Min RPKM: 40.5
Std RPKM: 28.7
Median RPKM: 77
GTEX-WEY5-1426-SM-4LMJ3 229.8
GTEX-13CF3-1426-SM-5K7YY 199.1
GTEX-14ICL-1226-SM-5S2RD 182.9
GTEX-X5EB-0926-SM-46MVT 152.9
GTEX-ZYVF-2826-SM-5GIDK 143.4
GTEX-11WQK-2126-SM-5EQME 141.7
GTEX-145LS-2726-SM-5Q5D8 140.9
GTEX-OXRL-1426-SM-3NM9E 137.6
Show all