SNRPB

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:81.3 FPKM
GTEx:43.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA003482

 

Antibody CAB009610

 

Endothelial cells

Not detected   Medium  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not available   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

81.3

overview Male, age 54
Sample 1
FPKM: 67.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 89.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 100.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 56.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 72.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 81.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 101.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

43.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 39.0
Samples: 149

Max RPKM: 102.1
Min RPKM: 21.8
Std RPKM: 9.9
Median RPKM: 36.2
GTEX-13O1R-2426-SM-5KLZZ 102.1
GTEX-11WQK-2526-SM-5CVL8 70.2
GTEX-11TUW-2326-SM-5EQMO 68.1
GTEX-11TT1-0926-SM-5GU5M 63.7
GTEX-1399U-2226-SM-5KLZI 60.0
GTEX-ZLFU-1426-SM-4WWEU 58.2
GTEX-14E6C-2226-SM-5QGQG 56.7
GTEX-14A5H-1626-SM-5SIAN 56.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 48.2
Samples: 196

Max RPKM: 95.4
Min RPKM: 25.6
Std RPKM: 13.4
Median RPKM: 45.2
GTEX-QDVN-1326-SM-48TZ3 95.4
GTEX-QMRM-1226-SM-447C6 95.0
GTEX-PWOO-1326-SM-48TCJ 92.1
GTEX-11TT1-1026-SM-5PNW7 89.4
GTEX-146FQ-1926-SM-5NQBY 88.5
GTEX-1399R-2226-SM-5P9JB 83.2
GTEX-XV7Q-2126-SM-4BRVX 80.4
GTEX-T5JW-1126-SM-4DM5V 76.3
Show all