DEK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:56.1 FPKM
GTEx:31.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA054505

 

Antibody HPA057799

 

Antibody CAB015226

 

Endothelial cells

Low   Low   Medium  

Glandular cells

Medium   Medium   Medium  

Peripheral nerve/ganglion

Not available   Medium   Not available  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

56.1

overview Male, age 54
Sample 1
FPKM: 53.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 58.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 64.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 39.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 62.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 51.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 62.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

31.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 35.9
Samples: 149

Max RPKM: 61.6
Min RPKM: 20.3
Std RPKM: 7.4
Median RPKM: 35.2
GTEX-ZTSS-1226-SM-51MSZ 61.6
GTEX-ZT9W-1726-SM-51MS3 57.3
GTEX-11WQK-2526-SM-5CVL8 55.3
GTEX-ZPCL-1626-SM-57WGC 55.0
GTEX-131XG-1526-SM-5GCNQ 54.2
GTEX-ZVT2-1726-SM-51MRO 53.8
GTEX-ZLFU-1426-SM-4WWEU 48.4
GTEX-145ME-1126-SM-5SIAT 48.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 27.8
Samples: 196

Max RPKM: 52.8
Min RPKM: 14.6
Std RPKM: 8
Median RPKM: 26.4
GTEX-XXEK-1926-SM-4BRVD 52.8
GTEX-ZV6S-1226-SM-59HLH 47.5
GTEX-V955-1626-SM-4JBHJ 46.4
GTEX-14AS3-1126-SM-5Q5CR 46.3
GTEX-11TTK-2426-SM-5PNYO 45.8
GTEX-13CF3-1426-SM-5K7YY 45.7
GTEX-12WSL-1626-SM-5GCMU 44.7
GTEX-1128S-1626-SM-5H12O 44.3
Show all