ATXN1

COLON - Expression summary

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RNA expression

HPA:3.9 FPKM
GTEx:4.0 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA008335

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

3.9

overview Male, age 54
Sample 1
FPKM: 4.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.8
Samples: 149

Max RPKM: 7.1
Min RPKM: 1.6
Std RPKM: 0.9
Median RPKM: 4.8
GTEX-12WSG-2426-SM-5EQLZ 7.1
GTEX-ZC5H-2426-SM-4WAZ6 6.9
GTEX-WYVS-1126-SM-4SOJX 6.8
GTEX-12KS4-2326-SM-5EGJB 6.6
GTEX-14E6E-1726-SM-5S2R6 6.6
GTEX-13OW5-2826-SM-5KM1G 6.5
GTEX-XV7Q-2226-SM-4BRVY 6.5
GTEX-ZAB5-1426-SM-5HL9D 6.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 14
Min RPKM: 1.2
Std RPKM: 1.5
Median RPKM: 3
GTEX-14C38-2626-SM-5RQI4 14.0
GTEX-ZYFC-2626-SM-5NQ6S 7.4
GTEX-14AS3-1126-SM-5Q5CR 7.1
GTEX-U3ZH-1326-SM-4DXSF 6.4
GTEX-13O3P-2326-SM-5KM55 6.1
GTEX-XXEK-1926-SM-4BRVD 6.1
GTEX-11GSP-1626-SM-5986N 6.0
GTEX-11ONC-2026-SM-5HL61 6.0
Show all