COL21A1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.1 FPKM
GTEx:4.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA031210

 

Antibody HPA031212

 

Antibody HPA031213

 

Endothelial cells

Medium   Low   Medium  

Glandular cells

Medium   Medium   High  

Peripheral nerve/ganglion

Low   Medium   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

1.1

overview Male, age 54
Sample 1
FPKM: 1.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.3
Samples: 149

Max RPKM: 45.9
Min RPKM: 0.9
Std RPKM: 4.7
Median RPKM: 7
GTEX-13111-1926-SM-5GCOL 45.9
GTEX-YJ8O-1426-SM-5PNV9 21.9
GTEX-ZVT4-2626-SM-5N9GJ 17.7
GTEX-147GR-2826-SM-5RQK8 15.7
GTEX-12ZZY-2726-SM-5EQ45 14.6
GTEX-13PVQ-2726-SM-5L3H7 14.3
GTEX-145MH-2726-SM-5QGQ6 14.1
GTEX-13PL7-2426-SM-5J2N3 14.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.5
Samples: 196

Max RPKM: 15.4
Min RPKM: 0
Std RPKM: 2.8
Median RPKM: 1.4
GTEX-11P81-1126-SM-5GU5G 15.4
GTEX-S341-1426-SM-4AD6U 14.1
GTEX-13U4I-2426-SM-5LU34 11.4
GTEX-11TTK-2426-SM-5PNYO 11.0
GTEX-V955-1626-SM-4JBHJ 10.6
GTEX-Y114-1526-SM-4TT79 9.5
GTEX-X5EB-0926-SM-46MVT 9.3
GTEX-RWS6-1826-SM-47JXX 8.9
Show all