STAMBP

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:17.1 FPKM
GTEx:4.5 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA035800

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

? »

Average FPKM

17.1

overview Male, age 54
Sample 1
FPKM: 16.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 15.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 19.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

4.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.0
Samples: 149

Max RPKM: 6.5
Min RPKM: 2.5
Std RPKM: 0.7
Median RPKM: 3.9
GTEX-131XG-1526-SM-5GCNQ 6.5
GTEX-Y9LG-1326-SM-4VBQB 6.3
GTEX-12WSG-2426-SM-5EQLZ 5.9
GTEX-WI4N-2226-SM-4OOS9 5.4
GTEX-ZLV1-1326-SM-4WWER 5.4
GTEX-13OVI-2126-SM-5KM3U 5.3
GTEX-145ME-1126-SM-5SIAT 5.3
GTEX-111YS-1826-SM-5GIEP 5.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.9
Samples: 196

Max RPKM: 6.9
Min RPKM: 1.6
Std RPKM: 0.8
Median RPKM: 5
GTEX-11EM3-1526-SM-5A5KN 6.9
GTEX-O5YT-1426-SM-3MJHC 6.8
GTEX-131XG-1826-SM-5LZV4 6.7
GTEX-ZF2S-1926-SM-4WWAN 6.7
GTEX-PWN1-1426-SM-48TDF 6.6
GTEX-ZV7C-1526-SM-5NQ72 6.6
GTEX-R53T-1326-SM-48FCQ 6.4
GTEX-Y5LM-1526-SM-4VDTA 6.4
Show all