STX16

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:17.1 FPKM
GTEx:40.2 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041019

 

Antibody HPA042033

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

17.1

overview Male, age 54
Sample 1
FPKM: 19.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 17.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 17.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 16.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 19.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

40.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 46.1
Samples: 149

Max RPKM: 87.2
Min RPKM: 18.6
Std RPKM: 16.6
Median RPKM: 44.5
GTEX-1477Z-2126-SM-5Q5CM 87.2
GTEX-13N2G-2226-SM-5IJCU 86.9
GTEX-13OW6-2226-SM-5N9FL 84.2
GTEX-13OW5-2826-SM-5KM1G 78.8
GTEX-14A5I-2426-SM-5Q5CP 78.0
GTEX-ZC5H-2426-SM-4WAZ6 76.0
GTEX-11EMC-1426-SM-5N9E4 75.3
GTEX-139D8-2926-SM-5IJBM 75.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 34.3
Samples: 196

Max RPKM: 69.2
Min RPKM: 17.5
Std RPKM: 9.8
Median RPKM: 32.3
GTEX-147JS-2526-SM-5S2Q8 69.2
GTEX-13FHP-2426-SM-5KLZ5 65.8
GTEX-U3ZH-1326-SM-4DXSF 63.5
GTEX-11O72-2226-SM-5PNW2 62.7
GTEX-13U4I-2426-SM-5LU34 61.6
GTEX-13O3P-2326-SM-5KM55 60.3
GTEX-145MO-2426-SM-5NQ9W 59.1
GTEX-ZYFC-2626-SM-5NQ6S 57.2
Show all