SARDH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.6 FPKM
GTEx:0.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA057267

 

Antibody HPA058086

 

Endothelial cells

Medium   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

0.6

overview Male, age 54
Sample 1
FPKM: 0.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 1.6
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.4
GTEX-ZPU1-1726-SM-4WWFV 1.6
GTEX-WYVS-1126-SM-4SOJX 1.5
GTEX-YJ8O-1426-SM-5PNV9 1.3
GTEX-1212Z-1826-SM-5FQSH 1.2
GTEX-X4EO-2726-SM-4E3HS 1.2
GTEX-YECK-2826-SM-5IFHF 1.2
GTEX-12WSD-2626-SM-5EGJE 1.1
GTEX-145LS-2926-SM-5O99G 1.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.4
Samples: 196

Max RPKM: 1.3
Min RPKM: 0
Std RPKM: 0.2
Median RPKM: 0.3
GTEX-13O3O-2526-SM-5L3DR 1.3
GTEX-13OW6-2126-SM-5N9GL 1.2
GTEX-U3ZH-1326-SM-4DXSF 1.2
GTEX-X5EB-0926-SM-46MVT 1.2
GTEX-147JS-2526-SM-5S2Q8 1.1
GTEX-111VG-2226-SM-5N9DU 1.0
GTEX-14BMV-2426-SM-5S2PP 1.0
GTEX-11ZVC-2126-SM-5EGJ1 0.9
Show all