LRRC39

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:0.4 FPKM
GTEx:1.2 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA028443

 

Antibody HPA029724

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Medium  
   
   

COLON - HPA RNA-seq

? »

Average FPKM

0.4

overview Male, age 54
Sample 1
FPKM: 0.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

1.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 11.1
Min RPKM: 0.3
Std RPKM: 1.1
Median RPKM: 1.1
GTEX-14E6C-2226-SM-5QGQG 11.1
GTEX-11TUW-2326-SM-5EQMO 4.9
GTEX-13O1R-2426-SM-5KLZZ 4.2
GTEX-148VJ-2426-SM-5NQ9Y 4.2
GTEX-11DXX-1926-SM-5EGJK 3.9
GTEX-12696-1926-SM-5EGJT 3.4
GTEX-X4EO-2726-SM-4E3HS 3.0
GTEX-ZPCL-1626-SM-57WGC 3.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.0
Samples: 196

Max RPKM: 6
Min RPKM: 0.1
Std RPKM: 0.7
Median RPKM: 0.9
GTEX-13OVI-2026-SM-5J1MU 6.0
GTEX-11TUW-2026-SM-5EQL8 4.6
GTEX-S341-1426-SM-4AD6U 4.0
GTEX-ZPCL-1826-SM-57WF1 3.3
GTEX-148VJ-2626-SM-5QGPI 3.0
GTEX-13O3O-2526-SM-5L3DR 2.9
GTEX-11WQK-2126-SM-5EQME 2.7
GTEX-11TTK-2426-SM-5PNYO 2.6
Show all