MTHFD1L

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.4 FPKM
GTEx:2.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA015006

 

Antibody HPA029040

 

Antibody HPA029041

 

Antibody HPA050052

 

Endothelial cells

Medium   Medium   Not detected   Low  

Glandular cells

High   High   Medium   High  

Peripheral nerve/ganglion

Medium   Medium   Low   Medium  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

5.4

overview Male, age 54
Sample 1
FPKM: 2.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.5
Samples: 149

Max RPKM: 10.6
Min RPKM: 0.5
Std RPKM: 1.8
Median RPKM: 2
GTEX-13O1R-2426-SM-5KLZZ 10.6
GTEX-WI4N-2226-SM-4OOS9 9.1
GTEX-11TT1-0926-SM-5GU5M 9.0
GTEX-14A5H-1626-SM-5SIAN 8.8
GTEX-ZTTD-2626-SM-57WEX 7.4
GTEX-14E6C-2226-SM-5QGQG 7.0
GTEX-11TUW-2326-SM-5EQMO 6.8
GTEX-14C39-1626-SM-5S2P4 6.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.0
Samples: 196

Max RPKM: 12.8
Min RPKM: 0.4
Std RPKM: 1.6
Median RPKM: 1.5
GTEX-11TT1-1026-SM-5PNW7 12.8
GTEX-PWOO-1326-SM-48TCJ 7.4
GTEX-VJYA-2026-SM-4KL1K 7.2
GTEX-11TUW-2026-SM-5EQL8 6.9
GTEX-ZYVF-2826-SM-5GIDK 6.7
GTEX-13OVJ-1726-SM-5IJDZ 6.3
GTEX-Q2AH-1226-SM-48TZL 6.0
GTEX-144GM-1226-SM-5LU52 5.9
Show all