GLE1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:13.2 FPKM
GTEx:9.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA041689

 

Antibody HPA043538

 

Endothelial cells

Medium   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

13.2

overview Male, age 54
Sample 1
FPKM: 11.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 15.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 16.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 12.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.4
Samples: 149

Max RPKM: 12.9
Min RPKM: 4.8
Std RPKM: 1.3
Median RPKM: 8.5
GTEX-146FH-2426-SM-5Q5EW 12.9
GTEX-Y5LM-1426-SM-5RQJL 12.0
GTEX-11P81-1426-SM-5P9JN 11.7
GTEX-131XG-1526-SM-5GCNQ 11.3
GTEX-ZPU1-1726-SM-4WWFV 10.8
GTEX-WHWD-1526-SM-4OORV 10.7
GTEX-Y9LG-1326-SM-4VBQB 10.6
GTEX-ZYFG-1826-SM-5GZWX 10.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 10.7
Samples: 196

Max RPKM: 16.5
Min RPKM: 3
Std RPKM: 2.4
Median RPKM: 10.8
GTEX-WFG7-1526-SM-4LVMG 16.5
GTEX-OXRK-1726-SM-3NB16 15.5
GTEX-R53T-1326-SM-48FCQ 15.2
GTEX-XMK1-1726-SM-4B64Z 15.2
GTEX-139YR-2126-SM-5KM11 14.9
GTEX-WHWD-1226-SM-4OOS1 14.9
GTEX-132AR-2726-SM-5PNVN 14.8
GTEX-111CU-1426-SM-5GZYP 14.7
Show all