ID3

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:14.4 FPKM
GTEx:35.7 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:High
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA024677

 

Antibody CAB021353

 

Fibroblasts

High   Medium  

Keratinocytes

High   Low  

Langerhans

High   Low  

Melanocytes

High   Low  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:High
 
 
 
 

Antibody staining

Antibody HPA024677

 

Antibody CAB021353

 

Epidermal cells

High   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

14.4

overview Female, age 34
Sample 1
FPKM: 4.3
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 2.6
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 36.2

SKIN - GTEx RNA-seq

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Average RPKM

35.7

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 40.0
Samples: 250

Max RPKM: 202.2
Min RPKM: 8.7
Std RPKM: 26.2
Median RPKM: 31.9
GTEX-XK95-0226-SM-4AT58 202.2
GTEX-13QBU-1226-SM-5LU4G 146.7
GTEX-X585-2426-SM-46MW2 116.6
GTEX-ZYFG-1526-SM-5GZYM 112.2
GTEX-117YX-1926-SM-5GIEC 108.9
GTEX-131XE-1626-SM-5K7VO 108.9
GTEX-13FTW-0326-SM-5K7UW 107.7
GTEX-ZLV1-1526-SM-4WWBC 107.2
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 31.4
Samples: 357

Max RPKM: 151.1
Min RPKM: 5.7
Std RPKM: 16.4
Median RPKM: 27.9
GTEX-111CU-1926-SM-5GZYZ 151.1
GTEX-ZQUD-1426-SM-57WER 106.2
GTEX-XPVG-2626-SM-4B669 96.9
GTEX-12ZZZ-0626-SM-5DUXI 91.7
GTEX-13PVQ-0126-SM-5SIB4 88.6
GTEX-14753-0426-SM-5NQAM 78.3
GTEX-13OW5-0126-SM-5MR3A 77.4
GTEX-OXRK-0226-SM-3NB2G 73.6
Show all