ID3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:41.5 FPKM
GTEx:46.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA024677

 

Antibody CAB021353

 

Endothelial cells

High   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

High   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

41.5

overview Male, age 54
Sample 1
FPKM: 42.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 33.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 36.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 100.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 33.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

46.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 35.3
Samples: 149

Max RPKM: 93.4
Min RPKM: 8.5
Std RPKM: 15.6
Median RPKM: 31.5
GTEX-WFON-1326-SM-4LVMN 93.4
GTEX-132AR-2826-SM-5IJFV 77.4
GTEX-13QBU-2026-SM-5KLZB 71.5
GTEX-ZLFU-1426-SM-4WWEU 70.4
GTEX-14C39-1626-SM-5S2P4 70.1
GTEX-YEC3-2026-SM-4WWFL 65.7
GTEX-13VXT-2026-SM-5L3EW 64.8
GTEX-139D8-2926-SM-5IJBM 64.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 58.1
Samples: 196

Max RPKM: 295.9
Min RPKM: 19.3
Std RPKM: 28.3
Median RPKM: 55
GTEX-13OVG-1426-SM-5K7VP 295.9
GTEX-13W3W-2126-SM-5K7UX 161.6
GTEX-111VG-2226-SM-5N9DU 139.6
GTEX-117YW-1826-SM-5PNY5 134.1
GTEX-Y3IK-1826-SM-4WWDS 133.5
GTEX-13OVI-2026-SM-5J1MU 123.9
GTEX-14ICL-1226-SM-5S2RD 121.8
GTEX-14BMV-2426-SM-5S2PP 119.3
Show all