HMGCL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:38.5 FPKM
GTEx:10.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA004727

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 

COLON - HPA RNA-seq

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Average FPKM

38.5

overview Male, age 54
Sample 1
FPKM: 34.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 37.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 45.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 33.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 42.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 52.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

10.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.9
Samples: 149

Max RPKM: 11.5
Min RPKM: 3.7
Std RPKM: 1.3
Median RPKM: 8
GTEX-ZAB4-2426-SM-5HL8A 11.5
GTEX-146FH-2426-SM-5Q5EW 11.3
GTEX-Y5LM-1426-SM-5RQJL 11.3
GTEX-13PL7-2426-SM-5J2N3 10.4
GTEX-11P81-1426-SM-5P9JN 10.3
GTEX-1399U-2226-SM-5KLZI 10.3
GTEX-1477Z-2126-SM-5Q5CM 10.3
GTEX-X15G-1526-SM-4PQZM 10.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.7
Samples: 196

Max RPKM: 32.9
Min RPKM: 2.1
Std RPKM: 5.7
Median RPKM: 13.8
GTEX-1399R-2226-SM-5P9JB 32.9
GTEX-XUJ4-2026-SM-4BOOW 28.7
GTEX-T5JW-1126-SM-4DM5V 27.1
GTEX-Y5LM-1526-SM-4VDTA 26.2
GTEX-Y3IK-1826-SM-4WWDS 26.0
GTEX-TML8-1326-SM-4DXTO 25.9
GTEX-P4QT-1426-SM-3NMCX 25.8
GTEX-U3ZN-2126-SM-4DXU1 25.0
Show all