CTH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.1 FPKM
GTEx:1.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021591

 

Antibody HPA023300

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not detected   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

5.1

overview Male, age 54
Sample 1
FPKM: 4.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 4.9
Min RPKM: 0.1
Std RPKM: 0.5
Median RPKM: 0.8
GTEX-13O61-1526-SM-5KM3P 4.9
GTEX-148VJ-2426-SM-5NQ9Y 2.8
GTEX-XBED-1726-SM-47JYO 2.8
GTEX-13VXT-2026-SM-5L3EW 2.3
GTEX-Y3I4-1126-SM-4TT7Y 2.3
GTEX-11WQK-2526-SM-5CVL8 2.0
GTEX-WFON-1326-SM-4LVMN 2.0
GTEX-13X6K-2726-SM-5O9DG 1.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.1
Samples: 196

Max RPKM: 7.1
Min RPKM: 0.3
Std RPKM: 1
Median RPKM: 2
GTEX-12KS4-2426-SM-5LU8P 7.1
GTEX-117YW-1826-SM-5PNY5 6.2
GTEX-14C38-2626-SM-5RQI4 5.1
GTEX-U3ZN-2126-SM-4DXU1 5.0
GTEX-11TT1-1026-SM-5PNW7 4.8
GTEX-11DXZ-1726-SM-5H12M 4.5
GTEX-PWOO-1326-SM-48TCJ 4.5
GTEX-UJHI-1126-SM-4IHLN 4.3
Show all