ICMT

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:14.4 FPKM
GTEx:7.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Not detected
Langerhans:Medium
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA032024

 

Antibody HPA032025

 

Fibroblasts

Medium   Medium  

Keratinocytes

Not detected   Medium  

Langerhans

Medium   Low  

Melanocytes

Low   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 
 

Antibody staining

Antibody HPA032024

 

Antibody HPA032025

 

Epidermal cells

Low   Low  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

14.4

overview Female, age 34
Sample 1
FPKM: 16.1
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 13.6
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 13.4

SKIN - GTEx RNA-seq

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Average RPKM

7.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 7.1
Samples: 250

Max RPKM: 15.3
Min RPKM: 1.9
Std RPKM: 2.3
Median RPKM: 6.9
GTEX-12ZZX-2426-SM-5GCOE 15.3
GTEX-11DXX-2126-SM-5PNYR 14.2
GTEX-139YR-1026-SM-5LZYN 14.2
GTEX-WFON-1926-SM-3LK7L 13.8
GTEX-145MH-2826-SM-5RQJF 13.7
GTEX-ZZ64-1026-SM-5GZXG 13.1
GTEX-131YS-2826-SM-5EQ47 12.2
GTEX-13VXU-0626-SM-5L3F9 12.2
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 8.0
Samples: 357

Max RPKM: 21.7
Min RPKM: 2.2
Std RPKM: 2.7
Median RPKM: 7.8
GTEX-12ZZX-0126-SM-5EGK9 21.7
GTEX-ZYT6-0226-SM-5NQ6T 19.4
GTEX-13OW6-0426-SM-5L3HM 17.3
GTEX-139TT-0126-SM-5K7Y5 16.3
GTEX-13G51-2526-SM-5LZYK 16.1
GTEX-12584-0126-SM-5EGKQ 14.9
GTEX-13112-2826-SM-5DUWH 14.9
GTEX-11WQK-0526-SM-5EQLD 14.7
Show all