ICMT

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:17.8 FPKM
GTEx:9.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA032024

 

Antibody HPA032025

 

Endothelial cells

High   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Low  
   
   

COLON - HPA RNA-seq

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Average FPKM

17.8

overview Male, age 54
Sample 1
FPKM: 18.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 19.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 20.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 18.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 17.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 17.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.0
Samples: 149

Max RPKM: 23.4
Min RPKM: 2.1
Std RPKM: 4.2
Median RPKM: 8.4
GTEX-131XG-1526-SM-5GCNQ 23.4
GTEX-11I78-1326-SM-5PNY9 19.4
GTEX-XAJ8-0726-SM-47JY5 19.1
GTEX-14E6E-1726-SM-5S2R6 17.2
GTEX-11EM3-1626-SM-5N9CO 16.7
GTEX-111YS-1826-SM-5GIEP 16.4
GTEX-11P7K-1826-SM-5HL5A 16.4
GTEX-ZZ64-0826-SM-5E449 16.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.2
Samples: 196

Max RPKM: 19.2
Min RPKM: 1.7
Std RPKM: 3
Median RPKM: 9
GTEX-ZV6S-1226-SM-59HLH 19.2
GTEX-117YX-0826-SM-5H11J 18.2
GTEX-XAJ8-0426-SM-47JYJ 18.2
GTEX-131XG-1826-SM-5LZV4 17.0
GTEX-Q2AI-0926-SM-48U1F 16.6
GTEX-ZYWO-1626-SM-5E44H 16.4
GTEX-144GN-1126-SM-5LU33 16.2
GTEX-ZYFG-1926-SM-5GID5 15.7
Show all