ID2

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:75.7 FPKM
GTEx:60.5 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA027612

 

Antibody HPA028681

 

Endothelial cells

Medium   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

75.7

overview Male, age 54
Sample 1
FPKM: 72.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 76.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 61.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 94.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 57.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 114.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 53.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

60.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 67.5
Samples: 149

Max RPKM: 204.6
Min RPKM: 12.2
Std RPKM: 29.7
Median RPKM: 62
GTEX-14BMU-1326-SM-5RQIH 204.6
GTEX-WHPG-1626-SM-4M1ZL 143.0
GTEX-11ZTT-1626-SM-5EQKR 142.7
GTEX-1399U-2226-SM-5KLZI 138.9
GTEX-146FH-2426-SM-5Q5EW 137.7
GTEX-WFG7-1626-SM-4LVMF 132.2
GTEX-ZVT2-1726-SM-51MRO 130.6
GTEX-ZP4G-1526-SM-57WE5 126.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 53.5
Samples: 196

Max RPKM: 882.6
Min RPKM: 18
Std RPKM: 62
Median RPKM: 44.8
GTEX-14C38-2626-SM-5RQI4 882.6
GTEX-ZYFC-2626-SM-5NQ6S 107.3
GTEX-ZV6S-1226-SM-59HLH 107.1
GTEX-11EQ9-1426-SM-5987G 97.7
GTEX-XXEK-1926-SM-4BRVD 96.9
GTEX-11P81-1126-SM-5GU5G 95.9
GTEX-OXRL-1426-SM-3NM9E 94.0
GTEX-Y114-1526-SM-4TT79 89.9
Show all