SSR3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:65.9 FPKM
GTEx:21.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA014906

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

65.9

overview Male, age 54
Sample 1
FPKM: 68.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 61.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 57.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 35.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 79.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 85.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 73.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

21.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 21.1
Samples: 149

Max RPKM: 37.4
Min RPKM: 12.9
Std RPKM: 4.9
Median RPKM: 20.2
GTEX-14C5O-2626-SM-5RQI5 37.4
GTEX-11ZU8-1126-SM-5EQ5K 36.3
GTEX-YEC3-2026-SM-4WWFL 35.5
GTEX-ZTSS-1226-SM-51MSZ 33.3
GTEX-ZT9W-1726-SM-51MS3 33.1
GTEX-ZZ64-0826-SM-5E449 32.3
GTEX-14C39-1626-SM-5S2P4 31.6
GTEX-145MO-2626-SM-5QGPD 31.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 22.5
Samples: 196

Max RPKM: 40.9
Min RPKM: 12.6
Std RPKM: 5.5
Median RPKM: 21.8
GTEX-145LS-2726-SM-5Q5D8 40.9
GTEX-PWOO-1326-SM-48TCJ 40.1
GTEX-QDVN-1326-SM-48TZ3 40.0
GTEX-11TT1-1026-SM-5PNW7 39.8
GTEX-XV7Q-2126-SM-4BRVX 37.3
GTEX-13VXT-2426-SM-5LU46 36.5
GTEX-XAJ8-0426-SM-47JYJ 36.5
GTEX-14C38-2626-SM-5RQI4 36.1
Show all