TIMMDC1

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:7.9 FPKM
GTEx:29.7 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA053214

 

Antibody HPA055846

 

Endothelial cells

Medium   Medium  

Glandular cells

High   Low  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

7.9

overview Male, age 54
Sample 1
FPKM: 8.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 12.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

29.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 31.0
Samples: 149

Max RPKM: 68.7
Min RPKM: 12.6
Std RPKM: 6.3
Median RPKM: 31
GTEX-YEC3-2026-SM-4WWFL 68.7
GTEX-14E6E-1726-SM-5S2R6 45.1
GTEX-ZG7Y-1826-SM-4WWD3 43.7
GTEX-ZTSS-1226-SM-51MSZ 43.5
GTEX-ZLV1-1326-SM-4WWER 43.2
GTEX-ZF28-2526-SM-57WFH 41.7
GTEX-ZT9W-1726-SM-51MS3 41.2
GTEX-1399U-2226-SM-5KLZI 39.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 28.4
Samples: 196

Max RPKM: 49.6
Min RPKM: 10.4
Std RPKM: 5.6
Median RPKM: 28.4
GTEX-Y8LW-1226-SM-4WWDP 49.6
GTEX-X5EB-0926-SM-46MVT 48.1
GTEX-11TTK-2426-SM-5PNYO 44.5
GTEX-13W3W-2126-SM-5K7UX 41.6
GTEX-111YS-1626-SM-5GZZ9 40.4
GTEX-V955-1626-SM-4JBHJ 38.8
GTEX-12WSL-1626-SM-5GCMU 38.4
GTEX-O5YT-1426-SM-3MJHC 38.4
Show all