HMGXB3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.9 FPKM
GTEx:9.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002354

 

Antibody HPA005967

 

Endothelial cells

Not detected   High  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Not detected   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

7.9

overview Male, age 54
Sample 1
FPKM: 7.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.3
Samples: 149

Max RPKM: 18.9
Min RPKM: 5
Std RPKM: 1.9
Median RPKM: 8.1
GTEX-14E6C-2226-SM-5QGQG 18.9
GTEX-13O1R-2426-SM-5KLZZ 15.1
GTEX-13X6I-2726-SM-5Q5ET 15.1
GTEX-13PVQ-2726-SM-5L3H7 12.8
GTEX-14A5H-1626-SM-5SIAN 12.6
GTEX-11WQK-2526-SM-5CVL8 12.5
GTEX-148VJ-2426-SM-5NQ9Y 12.5
GTEX-12WSJ-1426-SM-5GCON 12.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 11.0
Samples: 196

Max RPKM: 17.8
Min RPKM: 5.6
Std RPKM: 2.3
Median RPKM: 10.9
GTEX-13OVJ-1726-SM-5IJDZ 17.8
GTEX-XUJ4-2026-SM-4BOOW 17.3
GTEX-UJMC-1326-SM-4IHLS 16.8
GTEX-PWN1-1426-SM-48TDF 16.2
GTEX-131XG-1826-SM-5LZV4 16.0
GTEX-11TT1-1026-SM-5PNW7 15.4
GTEX-13111-0726-SM-5DUVE 15.4
GTEX-11LCK-2026-SM-5A5MA 15.1
Show all