SUB1

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:17.7 FPKM
GTEx:14.1 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001311

 

Antibody CAB015351

 

Fibroblasts

Medium   Low  

Keratinocytes

Medium   Medium  

Langerhans

Medium   Low  

Melanocytes

Medium   Not detected  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:High
 
 
 
 

Antibody staining

Antibody HPA001311

 

Antibody CAB015351

 

Epidermal cells

High   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

17.7

overview Female, age 34
Sample 1
FPKM: 19.9
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 18.5
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 14.6

SKIN - GTEx RNA-seq

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Average RPKM

14.1

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 15.2
Samples: 250

Max RPKM: 28.5
Min RPKM: 6.4
Std RPKM: 3.6
Median RPKM: 14.6
GTEX-14A5H-0826-SM-5QGPJ 28.5
GTEX-YB5K-2026-SM-4VDT3 26.8
GTEX-131YS-2826-SM-5EQ47 26.3
GTEX-YEC4-1826-SM-4W1YP 24.2
GTEX-ZY6K-1426-SM-5GZX2 23.6
GTEX-14E6C-2426-SM-5S2NF 22.8
GTEX-13FTY-2126-SM-5IFFB 22.7
GTEX-ZAJG-1526-SM-5CVML 22.5
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 12.9
Samples: 357

Max RPKM: 24.8
Min RPKM: 4.2
Std RPKM: 2.9
Median RPKM: 12.6
GTEX-1192W-2626-SM-5Q5AF 24.8
GTEX-X4XY-0226-SM-4E3IZ 23.7
GTEX-145LS-0126-SM-5QGP1 23.1
GTEX-13NYC-0326-SM-5K7WP 22.3
GTEX-1122O-2126-SM-5EGIR 21.8
GTEX-11O72-0126-SM-59887 21.5
GTEX-146FH-0126-SM-5QGPP 20.5
GTEX-13PVQ-0126-SM-5SIB4 19.8
Show all