CDH6

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.9 FPKM
GTEx:0.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007047

 

Antibody HPA007456

 

Antibody CAB025274

 

Endothelial cells

Low   Medium   Low  

Glandular cells

Medium   Low   Not detected  

Peripheral nerve/ganglion

Low   Medium   Not available  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

0.9

overview Male, age 54
Sample 1
FPKM: 0.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 2.4
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 0.6
GTEX-WFON-1326-SM-4LVMN 2.4
GTEX-145LS-2926-SM-5O99G 2.3
GTEX-13SLW-2826-SM-5Q5ES 2.2
GTEX-12ZZY-2726-SM-5EQ45 2.0
GTEX-11DXY-2026-SM-5N9CZ 1.7
GTEX-13X6K-2726-SM-5O9DG 1.6
GTEX-13OW6-2226-SM-5N9FL 1.5
GTEX-147GR-2826-SM-5RQK8 1.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.5
Samples: 196

Max RPKM: 3.3
Min RPKM: 0
Std RPKM: 0.5
Median RPKM: 0.3
GTEX-111VG-2226-SM-5N9DU 3.3
GTEX-13OVG-1426-SM-5K7VP 3.0
GTEX-14BMV-2426-SM-5S2PP 2.4
GTEX-12ZZZ-2426-SM-5GCNN 2.3
GTEX-13OVI-2026-SM-5J1MU 2.1
GTEX-13W3W-2126-SM-5K7UX 2.1
GTEX-11O72-2226-SM-5PNW2 1.9
GTEX-13FHP-2426-SM-5KLZ5 1.8
Show all