CLINT1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:48.0 FPKM
GTEx:25.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA043280

 

Antibody HPA056947

 

Endothelial cells

Not detected   High  

Glandular cells

High   High  

Peripheral nerve/ganglion

Low   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

48.0

overview Male, age 54
Sample 1
FPKM: 57.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 63.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 58.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 30.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 34.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 43.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 48.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

25.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 21.6
Samples: 149

Max RPKM: 60.8
Min RPKM: 10.4
Std RPKM: 6.2
Median RPKM: 20.9
GTEX-14E6C-2226-SM-5QGQG 60.8
GTEX-11ZU8-1126-SM-5EQ5K 41.3
GTEX-11WQK-2526-SM-5CVL8 40.5
GTEX-14C5O-2626-SM-5RQI5 38.2
GTEX-11I78-1326-SM-5PNY9 37.2
GTEX-ZY6K-1326-SM-5GZWP 32.5
GTEX-12WSG-2426-SM-5EQLZ 30.6
GTEX-ZTTD-2626-SM-57WEX 30.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 28.4
Samples: 196

Max RPKM: 66.2
Min RPKM: 13.5
Std RPKM: 7.8
Median RPKM: 28.2
GTEX-144GM-1226-SM-5LU52 66.2
GTEX-11TT1-1026-SM-5PNW7 50.3
GTEX-XMK1-1726-SM-4B64Z 49.3
GTEX-U4B1-1126-SM-4DXV3 48.6
GTEX-OXRK-1726-SM-3NB16 43.6
GTEX-PWOO-1326-SM-48TCJ 43.5
GTEX-1128S-1626-SM-5H12O 43.3
GTEX-WHWD-1226-SM-4OOS1 41.8
Show all