HMGCS1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:44.2 FPKM
GTEx:19.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036913

 

Antibody HPA036914

 

Antibody CAB032907

 

Endothelial cells

Not detected   Not detected   Medium  

Glandular cells

High   High   Medium  

Peripheral nerve/ganglion

Not detected   Low   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

44.2

overview Male, age 54
Sample 1
FPKM: 111.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 24.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 35.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 31.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 30.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 59.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.0
Samples: 149

Max RPKM: 41.4
Min RPKM: 4.5
Std RPKM: 3.4
Median RPKM: 8.5
GTEX-XBED-1726-SM-47JYO 41.4
GTEX-11TT1-0926-SM-5GU5M 19.2
GTEX-V955-1726-SM-4JBHF 17.9
GTEX-11DXZ-1626-SM-5GIDI 17.3
GTEX-13X6I-2726-SM-5Q5ET 17.2
GTEX-12ZZW-2426-SM-5DUWE 15.0
GTEX-11WQK-2526-SM-5CVL8 12.3
GTEX-11P7K-1826-SM-5HL5A 12.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 30.3
Samples: 196

Max RPKM: 192.6
Min RPKM: 5.3
Std RPKM: 30.1
Median RPKM: 22.1
GTEX-117YW-1826-SM-5PNY5 192.6
GTEX-QDVN-1326-SM-48TZ3 187.9
GTEX-111CU-1426-SM-5GZYP 139.1
GTEX-131XG-1826-SM-5LZV4 130.2
GTEX-144GN-1126-SM-5LU33 122.4
GTEX-11TT1-1026-SM-5PNW7 115.3
GTEX-T5JW-1126-SM-4DM5V 114.9
GTEX-XBED-1526-SM-4AT5W 109.0
Show all