GMDS

COLON - Expression summary

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RNA expression

HPA:76.9 FPKM
GTEx:11.4 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA031528

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 

COLON - HPA RNA-seq

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Average FPKM

76.9

overview Male, age 54
Sample 1
FPKM: 105.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 60.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 98.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 43.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 64.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 61.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 104.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 8.9
Min RPKM: 0.8
Std RPKM: 1.3
Median RPKM: 1.5
GTEX-YJ8A-1726-SM-5P9IQ 8.9
GTEX-11TT1-0926-SM-5GU5M 7.5
GTEX-Y5LM-1426-SM-5RQJL 7.3
GTEX-XBED-1726-SM-47JYO 6.9
GTEX-11EQ9-1526-SM-5PNY7 6.6
GTEX-V955-1726-SM-4JBHF 6.2
GTEX-WQUQ-2626-SM-4MVNP 5.2
GTEX-131XG-1526-SM-5GCNQ 5.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.9
Samples: 196

Max RPKM: 66.4
Min RPKM: 0.6
Std RPKM: 16.4
Median RPKM: 20
GTEX-PWOO-1326-SM-48TCJ 66.4
GTEX-T5JW-1126-SM-4DM5V 65.4
GTEX-111CU-1426-SM-5GZYP 64.6
GTEX-11TT1-1026-SM-5PNW7 62.1
GTEX-QDVN-1326-SM-48TZ3 61.2
GTEX-XV7Q-2126-SM-4BRVX 60.1
GTEX-XMK1-1726-SM-4B64Z 56.0
GTEX-146FQ-1926-SM-5NQBY 53.4
Show all