ACCS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.7 FPKM
GTEx:8.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA018873

 

Antibody HPA021654

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.7

overview Male, age 54
Sample 1
FPKM: 2.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.3
Samples: 149

Max RPKM: 20
Min RPKM: 1.7
Std RPKM: 4.1
Median RPKM: 7.4
GTEX-XUZC-1526-SM-4BRV4 20.0
GTEX-Z93S-2626-SM-57WBX 19.3
GTEX-12ZZY-2726-SM-5EQ45 19.1
GTEX-WFON-1326-SM-4LVMN 19.0
GTEX-139TS-2226-SM-5J2N1 17.5
GTEX-ZAB4-2426-SM-5HL8A 17.5
GTEX-12KS4-2326-SM-5EGJB 17.2
GTEX-X15G-1526-SM-4PQZM 16.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 8.2
Samples: 196

Max RPKM: 20.7
Min RPKM: 0.6
Std RPKM: 3.7
Median RPKM: 7.8
GTEX-XUZC-1326-SM-4BRV2 20.7
GTEX-XPVG-1826-SM-4B64X 19.8
GTEX-U3ZN-2126-SM-4DXU1 19.2
GTEX-Z93S-2426-SM-5HL8N 19.0
GTEX-12KS4-2426-SM-5LU8P 18.5
GTEX-139T6-1326-SM-5IFFO 17.2
GTEX-YEC3-2426-SM-5IFJR 17.2
GTEX-ZAB4-2226-SM-5HL97 17.1
Show all