HTATIP2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:73.9 FPKM
GTEx:18.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006417

 

Antibody HPA024321

 

Endothelial cells

Not detected   Not detected  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

73.9

overview Male, age 54
Sample 1
FPKM: 77.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 79.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 89.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 89.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 56.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 44.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 81.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

18.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.6
Samples: 149

Max RPKM: 24.7
Min RPKM: 3.9
Std RPKM: 3.9
Median RPKM: 8.5
GTEX-132AR-2826-SM-5IJFV 24.7
GTEX-146FH-2426-SM-5Q5EW 24.0
GTEX-ZF28-2526-SM-57WFH 22.8
GTEX-1477Z-2126-SM-5Q5CM 18.9
GTEX-ZG7Y-1826-SM-4WWD3 18.5
GTEX-Y5LM-1426-SM-5RQJL 18.0
GTEX-ZV6S-1126-SM-57WE9 18.0
GTEX-13N2G-2226-SM-5IJCU 17.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 26.9
Samples: 196

Max RPKM: 83.6
Min RPKM: 2.8
Std RPKM: 16.6
Median RPKM: 25.3
GTEX-14E6E-1526-SM-5RQIG 83.6
GTEX-Y5LM-1526-SM-4VDTA 80.5
GTEX-111CU-1426-SM-5GZYP 62.2
GTEX-11EM3-1526-SM-5A5KN 61.3
GTEX-Q2AI-0926-SM-48U1F 61.1
GTEX-12BJ1-2126-SM-5BC5O 57.3
GTEX-R55D-1826-SM-48FEF 55.8
GTEX-131XG-1826-SM-5LZV4 55.5
Show all