WHSC1

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:15.8 FPKM
GTEx:5.1 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA015801

 

Antibody CAB068246

 

Antibody CAB068247

 

Endothelial cells

Medium   Medium   Low  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Not available   Not available   Not detected  
     
     
     

COLON - HPA RNA-seq

? »

Average FPKM

15.8

overview Male, age 54
Sample 1
FPKM: 13.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 16.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 25.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 21.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

5.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.1
Samples: 149

Max RPKM: 6.5
Min RPKM: 2.2
Std RPKM: 0.7
Median RPKM: 4.1
GTEX-12WSG-2426-SM-5EQLZ 6.5
GTEX-14E6C-2226-SM-5QGQG 6.2
GTEX-V955-1726-SM-4JBHF 6.1
GTEX-11WQK-2526-SM-5CVL8 5.9
GTEX-YJ8A-1726-SM-5P9IQ 5.8
GTEX-XUW1-1826-SM-4BOQD 5.6
GTEX-ZF28-2526-SM-57WFH 5.4
GTEX-14C5O-2626-SM-5RQI5 5.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.1
Samples: 196

Max RPKM: 11.2
Min RPKM: 1.8
Std RPKM: 1.8
Median RPKM: 6.3
GTEX-ZYWO-1626-SM-5E44H 11.2
GTEX-145LT-0926-SM-5LU9C 9.9
GTEX-U4B1-1126-SM-4DXV3 9.4
GTEX-XPVG-1826-SM-4B64X 9.4
GTEX-1399S-1926-SM-5J2M5 9.3
GTEX-131XG-1826-SM-5LZV4 9.1
GTEX-R53T-1326-SM-48FCQ 9.1
GTEX-ZF2S-1926-SM-4WWAN 9.1
Show all