SEPT4

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:4.5 FPKM
GTEx:5.0 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021587

 

Antibody HPA022905

 

Antibody CAB006855

 

Endothelial cells

Low   Medium   Low  

Glandular cells

Not detected   Not detected   Low  

Peripheral nerve/ganglion

Not detected   Low   Low  
     
     
     

COLON - HPA RNA-seq

? »

Average FPKM

4.5

overview Male, age 54
Sample 1
FPKM: 2.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

5.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.0
Samples: 149

Max RPKM: 15.3
Min RPKM: 2.1
Std RPKM: 2.4
Median RPKM: 5.5
GTEX-13SLW-2826-SM-5Q5ES 15.3
GTEX-13X6I-2726-SM-5Q5ET 15.3
GTEX-145LS-2926-SM-5O99G 13.9
GTEX-XV7Q-2226-SM-4BRVY 13.1
GTEX-ZAB4-2426-SM-5HL8A 12.4
GTEX-13OW8-2726-SM-5L3FZ 10.5
GTEX-X15G-1526-SM-4PQZM 10.5
GTEX-139D8-2926-SM-5IJBM 10.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 17.2
Min RPKM: 0.6
Std RPKM: 2.9
Median RPKM: 3.3
GTEX-13OVG-1426-SM-5K7VP 17.2
GTEX-13O3O-2526-SM-5L3DR 15.5
GTEX-13FHP-2426-SM-5KLZ5 14.7
GTEX-13O3P-2326-SM-5KM55 14.0
GTEX-13OVI-2026-SM-5J1MU 12.9
GTEX-ZAB4-2226-SM-5HL97 12.5
GTEX-111VG-2226-SM-5N9DU 12.2
GTEX-147JS-2526-SM-5S2Q8 11.6
Show all