UBTF

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:27.1 FPKM
GTEx:18.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA006385

 

Antibody CAB004611

 

Endothelial cells

High   High  

Glandular cells

High   High  

Peripheral nerve/ganglion

High   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

27.1

overview Male, age 54
Sample 1
FPKM: 24.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 30.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 26.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 25.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 28.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 22.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

18.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 19.3
Samples: 149

Max RPKM: 29.4
Min RPKM: 5.3
Std RPKM: 4.1
Median RPKM: 19.8
GTEX-131YS-2926-SM-5EGKI 29.4
GTEX-ZP4G-1526-SM-57WE5 27.2
GTEX-146FH-2426-SM-5Q5EW 26.9
GTEX-X15G-1526-SM-4PQZM 26.4
GTEX-11P81-1426-SM-5P9JN 26.2
GTEX-1399R-2126-SM-5K7WZ 25.8
GTEX-11GS4-1826-SM-5HL4T 25.6
GTEX-XUZC-1526-SM-4BRV4 25.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 17.1
Samples: 196

Max RPKM: 29.3
Min RPKM: 2.8
Std RPKM: 3.3
Median RPKM: 16.8
GTEX-U3ZH-1326-SM-4DXSF 29.3
GTEX-V955-1626-SM-4JBHJ 25.8
GTEX-R53T-1326-SM-48FCQ 24.8
GTEX-X5EB-0926-SM-46MVT 24.2
GTEX-PX3G-1426-SM-48U1J 24.1
GTEX-11P81-1126-SM-5GU5G 24.0
GTEX-11ZVC-2126-SM-5EGJ1 23.4
GTEX-147JS-2526-SM-5S2Q8 22.7
Show all