BLVRA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:17.3 FPKM
GTEx:27.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA042865

 

Antibody HPA054322

 

Endothelial cells

Medium   Low  

Glandular cells

Low   Medium  

Peripheral nerve/ganglion

Low   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

17.3

overview Male, age 54
Sample 1
FPKM: 10.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 26.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 39.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 18.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

27.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 35.8
Samples: 149

Max RPKM: 57.9
Min RPKM: 18.2
Std RPKM: 5.7
Median RPKM: 35.1
GTEX-ZPCL-1626-SM-57WGC 57.9
GTEX-14C5O-2626-SM-5RQI5 54.5
GTEX-1399U-2226-SM-5KLZI 51.9
GTEX-11P81-1426-SM-5P9JN 50.3
GTEX-11WQK-2526-SM-5CVL8 48.4
GTEX-ZPU1-1726-SM-4WWFV 48.1
GTEX-ZT9W-1726-SM-51MS3 46.4
GTEX-XV7Q-2226-SM-4BRVY 45.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.3
Samples: 196

Max RPKM: 50
Min RPKM: 2.3
Std RPKM: 12.4
Median RPKM: 14.9
GTEX-13U4I-2426-SM-5LU34 50.0
GTEX-11WQK-2126-SM-5EQME 47.3
GTEX-X5EB-0926-SM-46MVT 45.2
GTEX-14AS3-1126-SM-5Q5CR 44.5
GTEX-ZYVF-2826-SM-5GIDK 43.2
GTEX-1339X-1626-SM-5IJDN 43.0
GTEX-Y8LW-1226-SM-4WWDP 42.3
GTEX-11TTK-2426-SM-5PNYO 41.9
Show all