IQCE

COLON - Expression summary

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RNA expression

HPA:6.1 FPKM
GTEx:5.1 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA019515

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

High  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

6.1

overview Male, age 54
Sample 1
FPKM: 6.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 8.6
Min RPKM: 3.1
Std RPKM: 1.1
Median RPKM: 4.9
GTEX-XUW1-1826-SM-4BOQD 8.6
GTEX-ZTTD-2626-SM-57WEX 8.0
GTEX-13N2G-2226-SM-5IJCU 7.7
GTEX-12WSG-2426-SM-5EQLZ 7.4
GTEX-XQ8I-2326-SM-4BOQC 7.4
GTEX-ZVT4-2626-SM-5N9GJ 7.4
GTEX-139D8-2926-SM-5IJBM 7.3
GTEX-ZF28-2526-SM-57WFH 7.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.1
Samples: 196

Max RPKM: 9.1
Min RPKM: 1.9
Std RPKM: 1
Median RPKM: 5.1
GTEX-131XE-0826-SM-5HL9W 9.1
GTEX-X5EB-0926-SM-46MVT 7.7
GTEX-11WQK-2126-SM-5EQME 7.6
GTEX-TKQ2-1326-SM-4DXT9 7.4
GTEX-Q2AI-0926-SM-48U1F 7.3
GTEX-144GN-1126-SM-5LU33 7.1
GTEX-R55D-1826-SM-48FEF 7.1
GTEX-XUJ4-2026-SM-4BOOW 6.9
Show all