DFNA5

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.4 FPKM
GTEx:2.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA011326

 

Antibody CAB019306

 

Endothelial cells

Medium   High  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.4

overview Male, age 54
Sample 1
FPKM: 2.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.0
Samples: 149

Max RPKM: 7.3
Min RPKM: 0.9
Std RPKM: 1.1
Median RPKM: 2.8
GTEX-YEC3-2026-SM-4WWFL 7.3
GTEX-11ZTS-1526-SM-5N9G7 7.0
GTEX-12WSM-1426-SM-5GCPA 6.2
GTEX-139TS-2226-SM-5J2N1 6.2
GTEX-ZE7O-2626-SM-51MSS 6.1
GTEX-WFG7-1626-SM-4LVMF 5.5
GTEX-11DXX-1926-SM-5EGJK 5.1
GTEX-ZDTS-2726-SM-5L3E2 5.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.6
Samples: 196

Max RPKM: 7.2
Min RPKM: 0.1
Std RPKM: 1.2
Median RPKM: 1.1
GTEX-ZXES-1626-SM-5NQ7L 7.2
GTEX-11GSP-1626-SM-5986N 5.8
GTEX-13OVI-2026-SM-5J1MU 5.2
GTEX-1339X-1626-SM-5IJDN 4.6
GTEX-P78B-1726-SM-3P5ZV 4.5
GTEX-145LS-2726-SM-5Q5D8 4.4
GTEX-13W3W-2126-SM-5K7UX 4.2
GTEX-12WSJ-1526-SM-5GCNI 4.0
Show all