SP4

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.4 FPKM
GTEx:1.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA040395

 

Antibody CAB010246

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

1.4

overview Male, age 54
Sample 1
FPKM: 0.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.2
Samples: 149

Max RPKM: 2.5
Min RPKM: 0.4
Std RPKM: 0.3
Median RPKM: 1.2
GTEX-13X6K-2726-SM-5O9DG 2.5
GTEX-148VJ-2426-SM-5NQ9Y 2.2
GTEX-WFON-1326-SM-4LVMN 2.2
GTEX-13SLW-2826-SM-5Q5ES 2.1
GTEX-1477Z-2126-SM-5Q5CM 2.1
GTEX-147GR-2826-SM-5RQK8 2.1
GTEX-WHPG-1626-SM-4M1ZL 2.0
GTEX-ZAJG-2626-SM-5S2NU 2.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.0
Samples: 196

Max RPKM: 2.8
Min RPKM: 0.3
Std RPKM: 0.4
Median RPKM: 0.9
GTEX-14BMV-2426-SM-5S2PP 2.8
GTEX-13O3O-2526-SM-5L3DR 2.3
GTEX-R53T-1326-SM-48FCQ 2.3
GTEX-11P81-1126-SM-5GU5G 2.2
GTEX-S341-1426-SM-4AD6U 2.1
GTEX-12ZZZ-2426-SM-5GCNN 1.9
GTEX-OXRL-1426-SM-3NM9E 1.9
GTEX-V955-1626-SM-4JBHJ 1.9
Show all