ISYNA1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.4 FPKM
GTEx:10.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007931

 

Antibody HPA008232

 

Antibody CAB020720

 

Endothelial cells

Low   Medium   Medium  

Glandular cells

Not detected   Not detected   Low  

Peripheral nerve/ganglion

Not detected   Low   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

3.4

overview Male, age 54
Sample 1
FPKM: 3.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

10.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.7
Samples: 149

Max RPKM: 32.9
Min RPKM: 3.5
Std RPKM: 5.2
Median RPKM: 9.7
GTEX-13X6I-2726-SM-5Q5ET 32.9
GTEX-145LS-2926-SM-5O99G 27.0
GTEX-13OW6-2226-SM-5N9FL 26.1
GTEX-WFON-1326-SM-4LVMN 22.4
GTEX-13SLW-2826-SM-5Q5ES 22.0
GTEX-139D8-2926-SM-5IJBM 21.7
GTEX-YJ8A-1726-SM-5P9IQ 21.6
GTEX-12ZZX-2726-SM-5N9FT 20.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.2
Samples: 196

Max RPKM: 39.9
Min RPKM: 2.3
Std RPKM: 5.7
Median RPKM: 7.2
GTEX-111VG-2226-SM-5N9DU 39.9
GTEX-13OVI-2026-SM-5J1MU 36.1
GTEX-Z93S-2426-SM-5HL8N 27.5
GTEX-13OVG-1426-SM-5K7VP 24.0
GTEX-147JS-2526-SM-5S2Q8 23.4
GTEX-13O3O-2526-SM-5L3DR 23.1
GTEX-14BMV-2426-SM-5S2PP 23.1
GTEX-13FHP-2426-SM-5KLZ5 22.0
Show all