LIG1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.5 FPKM
GTEx:4.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA041431

 

Antibody CAB037015

 

Endothelial cells

Low   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

5.5

overview Male, age 54
Sample 1
FPKM: 4.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 10
Min RPKM: 0.8
Std RPKM: 1.4
Median RPKM: 2.5
GTEX-13X6K-2726-SM-5O9DG 10.0
GTEX-145LS-2926-SM-5O99G 7.5
GTEX-11ONC-1926-SM-5GU75 6.3
GTEX-ZAJG-2626-SM-5S2NU 6.3
GTEX-WQUQ-2626-SM-4MVNP 5.9
GTEX-13SLW-2826-SM-5Q5ES 5.7
GTEX-X15G-1526-SM-4PQZM 5.6
GTEX-13X6I-2726-SM-5Q5ET 5.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.7
Samples: 196

Max RPKM: 14.6
Min RPKM: 0.8
Std RPKM: 2.6
Median RPKM: 5.6
GTEX-PWOO-1326-SM-48TCJ 14.6
GTEX-R53T-1326-SM-48FCQ 12.6
GTEX-XMK1-1726-SM-4B64Z 11.9
GTEX-XUJ4-2026-SM-4BOOW 11.9
GTEX-146FQ-1926-SM-5NQBY 11.7
GTEX-12C56-0626-SM-5EGGC 11.4
GTEX-144GN-1126-SM-5LU33 11.0
GTEX-12KS4-2426-SM-5LU8P 10.7
Show all