DMPK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:14.5 FPKM
GTEx:75.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007164

 

Antibody HPA008905

 

Endothelial cells

Low   Low  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

14.5

overview Male, age 54
Sample 1
FPKM: 13.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 11.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 50.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

75.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 107.1
Samples: 149

Max RPKM: 291.2
Min RPKM: 25.7
Std RPKM: 57.3
Median RPKM: 96.3
GTEX-13CF2-1826-SM-5N9GK 291.2
GTEX-ZDTS-2726-SM-5L3E2 250.2
GTEX-139TS-2226-SM-5J2N1 249.3
GTEX-YECK-2826-SM-5IFHF 236.6
GTEX-ZVT3-2826-SM-5GU6A 234.3
GTEX-117XS-2226-SM-5GIE1 230.0
GTEX-11EMC-1426-SM-5N9E4 227.5
GTEX-11ZTS-1526-SM-5N9G7 222.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 44.5
Samples: 196

Max RPKM: 237.9
Min RPKM: 5.2
Std RPKM: 37.7
Median RPKM: 33.8
GTEX-11GSP-1626-SM-5986N 237.9
GTEX-11TTK-2426-SM-5PNYO 159.7
GTEX-13FHP-2426-SM-5KLZ5 149.2
GTEX-11ZVC-2126-SM-5EGJ1 146.6
GTEX-XAJ8-0426-SM-47JYJ 143.7
GTEX-13OW5-2626-SM-5MR3M 135.4
GTEX-Y3I4-1426-SM-4TT9C 134.3
GTEX-145MO-2426-SM-5NQ9W 132.9
Show all