EMC2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:30.2 FPKM
GTEx:22.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA022838

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

30.2

overview Male, age 54
Sample 1
FPKM: 24.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 32.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 29.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 30.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 32.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 30.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

22.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 24.2
Samples: 149

Max RPKM: 39.9
Min RPKM: 11.2
Std RPKM: 4
Median RPKM: 24.2
GTEX-11WQK-2526-SM-5CVL8 39.9
GTEX-145ME-1126-SM-5SIAT 34.9
GTEX-148VJ-2426-SM-5NQ9Y 32.9
GTEX-11TUW-2326-SM-5EQMO 32.5
GTEX-14C5O-2626-SM-5RQI5 32.5
GTEX-131XG-1526-SM-5GCNQ 31.9
GTEX-13O1R-2426-SM-5KLZZ 31.0
GTEX-XV7Q-2226-SM-4BRVY 30.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.0
Samples: 196

Max RPKM: 38.7
Min RPKM: 11.4
Std RPKM: 4.2
Median RPKM: 19.2
GTEX-11WQK-2126-SM-5EQME 38.7
GTEX-ZYVF-2826-SM-5GIDK 38.0
GTEX-11TTK-2426-SM-5PNYO 34.3
GTEX-XXEK-1926-SM-4BRVD 30.9
GTEX-11TUW-2026-SM-5EQL8 30.5
GTEX-12WSL-1626-SM-5GCMU 28.2
GTEX-13O3P-2326-SM-5KM55 28.1
GTEX-148VJ-2626-SM-5QGPI 27.4
Show all