JPH1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.2 FPKM
GTEx:1.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA008996

 

Antibody HPA009413

 

Antibody CAB013461

 

Endothelial cells

Low   Low   Medium  

Glandular cells

Low   Low   Medium  

Peripheral nerve/ganglion

Medium   Low   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

3.2

overview Male, age 54
Sample 1
FPKM: 5.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 2
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.4
GTEX-V955-1726-SM-4JBHF 2.0
GTEX-11WQK-2526-SM-5CVL8 1.8
GTEX-1477Z-2126-SM-5Q5CM 1.6
GTEX-YJ8A-1726-SM-5P9IQ 1.6
GTEX-XBED-1726-SM-47JYO 1.4
GTEX-13OW6-2226-SM-5N9FL 1.3
GTEX-WQUQ-2626-SM-4MVNP 1.3
GTEX-Y5LM-1426-SM-5RQJL 1.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.1
Samples: 196

Max RPKM: 6.3
Min RPKM: 0
Std RPKM: 1.2
Median RPKM: 2.1
GTEX-11TT1-1026-SM-5PNW7 6.3
GTEX-133LE-1526-SM-5IFEN 5.8
GTEX-PWOO-1326-SM-48TCJ 5.8
GTEX-U4B1-1126-SM-4DXV3 5.3
GTEX-XUJ4-2026-SM-4BOOW 5.2
GTEX-146FQ-1926-SM-5NQBY 4.8
GTEX-YF7O-1726-SM-5IFJ9 4.8
GTEX-TML8-1326-SM-4DXTO 4.6
Show all