SALL1

GENERAL INFORMATION

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Gene name

SALL1

Gene description

Spalt-like transcription factor 1

Protein class

Disease related genes
Plasma proteins
Predicted intracellular proteins
Transcription factors

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Tissue enhanced (thyroid gland)
GTEx:Tissue enhanced (thyroid gland)

Protein evidence

Evidence at protein level

Protein localization

General cytoplasmic expression.

ANTIBODY RELIABILITY

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Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Data reliability

Uncertain based on 1 antibody.
HPA049829
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Tissue enhanced (thyroid gland)

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enhanced (thyroid gland)

Organ

Expression



GENE INFORMATION

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Gene name

SALL1 (HGNC Symbol)

Synonyms

Hsal1, TBS, ZNF794

Description

Spalt-like transcription factor 1 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a zinc finger transcriptional repressor and may be part of the NuRD histone deacetylase complex (HDAC). Defects in this gene are a cause of Townes-Brocks syndrome (TBS) as well as bronchio-oto-renal syndrome (BOR). Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Chromosome

16

Cytoband

q12.1

Chromosome location (bp)

51135975 - 51151367

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000103449 (version 78.38)

Entrez gene

6299

UniProt

Q9NSC2 (UniProt - Evidence at protein level)

neXtProt

NX_Q9NSC2

Antibodypedia

SALL1 antibodies


PROTEIN BROWSER

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ENST00000251020
 
ENST00000440970
 
ENST00000566102
 
ENST00000570206
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SALL1-001 ENSP00000251020
ENST00000251020
Q9NSC2
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Show » Show » 1324 140.4 No 0
SALL1-002 ENSP00000455582
ENST00000566102
H3BQ32
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Show » 34 3.9 No 0
SALL1-003 ENSP00000456777
ENST00000570206
H3BSM9
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Show » Show » 1154 122 No 0
SALL1-201 ENSP00000407914
ENST00000440970
Q9NSC2
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Show » Show » 1227 129.6 No 0