CTCF

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.2 FPKM
GTEx:13.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA004122

 

Antibody CAB062550

 

Antibody CAB068181

 

Antibody CAB068182

 

Endothelial cells

Medium   Not detected   Medium   High  

Glandular cells

High   Medium   High   High  

Peripheral nerve/ganglion

Medium   Not detected   High   High  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

16.2

overview Male, age 54
Sample 1
FPKM: 13.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 19.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 13.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

13.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.4
Samples: 149

Max RPKM: 19.9
Min RPKM: 6.4
Std RPKM: 2.7
Median RPKM: 13.6
GTEX-12ZZY-2726-SM-5EQ45 19.9
GTEX-ZAB5-1426-SM-5HL9D 19.2
GTEX-WHWD-1526-SM-4OORV 18.3
GTEX-11P81-1426-SM-5P9JN 18.1
GTEX-1399R-2126-SM-5K7WZ 18.0
GTEX-ZPCL-1626-SM-57WGC 18.0
GTEX-WHPG-1626-SM-4M1ZL 17.9
GTEX-WYVS-1126-SM-4SOJX 17.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.8
Samples: 196

Max RPKM: 22.2
Min RPKM: 4.2
Std RPKM: 2.3
Median RPKM: 13.6
GTEX-R53T-1326-SM-48FCQ 22.2
GTEX-14AS3-1126-SM-5Q5CR 19.1
GTEX-V955-1626-SM-4JBHJ 18.6
GTEX-OIZH-1426-SM-3NB1O 18.5
GTEX-QEL4-1926-SM-4R1JI 18.5
GTEX-XXEK-1926-SM-4BRVD 18.4
GTEX-OXRK-1726-SM-3NB16 18.2
GTEX-139YR-2126-SM-5KM11 17.9
Show all