EMD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.2 FPKM
GTEx:43.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA000609

 

Antibody CAB001545

 

Antibody CAB002029

 

Antibody CAB062552

 

Endothelial cells

Low   Medium   Medium   Not detected  

Glandular cells

Low   Low   Medium   Not detected  

Peripheral nerve/ganglion

Medium   Medium   Not available   Medium  
       

COLON - HPA RNA-seq

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Average FPKM

11.2

overview Male, age 54
Sample 1
FPKM: 14.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 11.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 12.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

43.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 52.2
Samples: 149

Max RPKM: 95.9
Min RPKM: 30.3
Std RPKM: 10.5
Median RPKM: 50.5
GTEX-13O1R-2426-SM-5KLZZ 95.9
GTEX-11TUW-2326-SM-5EQMO 85.1
GTEX-Y9LG-1326-SM-4VBQB 84.7
GTEX-WI4N-2226-SM-4OOS9 83.6
GTEX-11WQK-2526-SM-5CVL8 78.6
GTEX-11EM3-1626-SM-5N9CO 77.3
GTEX-11ZU8-1126-SM-5EQ5K 74.2
GTEX-12WSM-1426-SM-5GCPA 69.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 34.9
Samples: 196

Max RPKM: 90.6
Min RPKM: 12.5
Std RPKM: 14.7
Median RPKM: 30.6
GTEX-WEY5-1426-SM-4LMJ3 90.6
GTEX-11WQK-2126-SM-5EQME 87.5
GTEX-ZYVF-2826-SM-5GIDK 85.7
GTEX-11TUW-2026-SM-5EQL8 75.6
GTEX-11O72-2226-SM-5PNW2 70.4
GTEX-YEC4-1926-SM-5IFHJ 68.7
GTEX-X5EB-0926-SM-46MVT 66.0
GTEX-OXRL-1426-SM-3NM9E 65.0
Show all