BMX

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.1 FPKM
GTEx:1.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001048

 

Antibody CAB032495

 

Endothelial cells

Medium   High  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Low   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

3.1

overview Male, age 54
Sample 1
FPKM: 0.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.5
Samples: 149

Max RPKM: 8.9
Min RPKM: 0.1
Std RPKM: 1.1
Median RPKM: 1.1
GTEX-WFON-1326-SM-4LVMN 8.9
GTEX-13X6K-2726-SM-5O9DG 7.3
GTEX-YEC3-2026-SM-4WWFL 5.0
GTEX-13OVJ-1826-SM-5KM2D 4.6
GTEX-14C39-1626-SM-5S2P4 4.4
GTEX-145LS-2926-SM-5O99G 4.3
GTEX-12ZZY-2726-SM-5EQ45 3.7
GTEX-11DXX-1926-SM-5EGJK 3.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.2
Samples: 196

Max RPKM: 13.2
Min RPKM: 0.3
Std RPKM: 1.5
Median RPKM: 1.8
GTEX-13OVI-2026-SM-5J1MU 13.2
GTEX-13OVG-1426-SM-5K7VP 9.4
GTEX-14C38-2626-SM-5RQI4 9.4
GTEX-ZXES-1626-SM-5NQ7L 9.4
GTEX-13W3W-2126-SM-5K7UX 6.3
GTEX-145LT-0926-SM-5LU9C 5.8
GTEX-13O3P-2326-SM-5KM55 4.9
GTEX-13O3O-2526-SM-5L3DR 4.7
Show all