VAPA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:24.2 FPKM
GTEx:20.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA009174

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

24.2

overview Male, age 54
Sample 1
FPKM: 23.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 26.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 25.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 31.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 21.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 18.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 22.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.6
Samples: 149

Max RPKM: 31.1
Min RPKM: 11.1
Std RPKM: 3.6
Median RPKM: 20.6
GTEX-11WQK-2526-SM-5CVL8 31.1
GTEX-ZTSS-1226-SM-51MSZ 28.5
GTEX-ZPCL-1626-SM-57WGC 28.0
GTEX-131XG-1526-SM-5GCNQ 27.2
GTEX-ZV6S-1126-SM-57WE9 27.1
GTEX-WFG7-1626-SM-4LVMF 26.8
GTEX-Y9LG-1326-SM-4VBQB 26.7
GTEX-1339X-1726-SM-5P9J9 26.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 19.9
Samples: 196

Max RPKM: 31.7
Min RPKM: 12.6
Std RPKM: 3.4
Median RPKM: 19.5
GTEX-11WQK-2126-SM-5EQME 31.7
GTEX-11TT1-1026-SM-5PNW7 30.7
GTEX-X5EB-0926-SM-46MVT 30.1
GTEX-ZV6S-1226-SM-59HLH 28.1
GTEX-13CF3-1426-SM-5K7YY 27.5
GTEX-13O61-1626-SM-5KM3T 27.2
GTEX-OIZH-1426-SM-3NB1O 27.1
GTEX-14E6E-1526-SM-5RQIG 26.7
Show all