APMAP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:34.5 FPKM
GTEx:27.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA012863

 

Endothelial cells

High  

Glandular cells

High  

Peripheral nerve/ganglion

High  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

34.5

overview Male, age 54
Sample 1
FPKM: 24.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 30.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 33.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 27.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 42.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 36.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 47.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

27.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.5
Samples: 149

Max RPKM: 40
Min RPKM: 12.1
Std RPKM: 4
Median RPKM: 20
GTEX-11TT1-0926-SM-5GU5M 40.0
GTEX-ZAB4-2426-SM-5HL8A 34.1
GTEX-11WQK-2526-SM-5CVL8 32.1
GTEX-WI4N-2226-SM-4OOS9 28.9
GTEX-13SLW-2826-SM-5Q5ES 28.1
GTEX-13X6I-2726-SM-5Q5ET 28.1
GTEX-12WSL-1826-SM-5LZW9 27.8
GTEX-WFON-1326-SM-4LVMN 27.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 33.8
Samples: 196

Max RPKM: 68
Min RPKM: 16.4
Std RPKM: 10.2
Median RPKM: 33.6
GTEX-ZXES-1626-SM-5NQ7L 68.0
GTEX-13W3W-2126-SM-5K7UX 64.5
GTEX-XV7Q-2126-SM-4BRVX 63.5
GTEX-O5YT-1426-SM-3MJHC 57.8
GTEX-T5JW-1126-SM-4DM5V 55.3
GTEX-R53T-1326-SM-48FCQ 54.7
GTEX-R55D-1826-SM-48FEF 54.6
GTEX-ZT9W-1826-SM-51MQX 53.9
Show all