NOP56

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.3 FPKM
GTEx:19.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA049918

 

Antibody CAB075757

 

Endothelial cells

Not detected   Low  

Glandular cells

Not detected   Low  

Peripheral nerve/ganglion

Not detected   Low  
   
   

COLON - HPA RNA-seq

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Average FPKM

20.3

overview Male, age 54
Sample 1
FPKM: 13.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 19.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 29.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 27.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 18.8
Samples: 149

Max RPKM: 48.1
Min RPKM: 10.9
Std RPKM: 5.4
Median RPKM: 17.8
GTEX-13O1R-2426-SM-5KLZZ 48.1
GTEX-11TT1-0926-SM-5GU5M 42.5
GTEX-132AR-2826-SM-5IJFV 34.7
GTEX-12WSJ-1426-SM-5GCON 31.9
GTEX-ZAJG-2626-SM-5S2NU 31.4
GTEX-11WQK-2526-SM-5CVL8 31.3
GTEX-11I78-1326-SM-5PNY9 29.5
GTEX-14A5H-1626-SM-5SIAN 28.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.4
Samples: 196

Max RPKM: 46.9
Min RPKM: 6.4
Std RPKM: 5.8
Median RPKM: 19.2
GTEX-11TT1-1026-SM-5PNW7 46.9
GTEX-146FQ-1926-SM-5NQBY 40.5
GTEX-11WQK-2126-SM-5EQME 37.4
GTEX-11TUW-2026-SM-5EQL8 36.1
GTEX-R53T-1326-SM-48FCQ 34.5
GTEX-144GM-1226-SM-5LU52 34.2
GTEX-QMRM-1226-SM-447C6 34.1
GTEX-13OVJ-1726-SM-5IJDZ 33.7
Show all